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Title:
Weakly Reversible Realizations of Biochemical Systems Theory (BST) Models
Authors:
Exequiel Jun V. Villejo, Dylan Antonio SJ. Talabis
doi:
Volume
93
Issue
3
Year
2025
Pages
631-687
Abstract Biochemical Systems Theory (BST) is a modeling framework that employs power-law formulations to effectively capture the inherent nonlinearities and heterogeneity of biological systems. Recent research has shown that BST models can be modelled by reaction networks. However, many key results in Chemical Reaction Network Theory (CRNT) rely on the condition of weak reversibility - a property often absent in reaction networks derived from BST models. To address this challenge, this paper develops algorithms for constructing weakly reversible realizations of two variants of BST models: S-systems and General Mass Action (GMA) systems. By applying these algorithms, fundamental network properties are simplified, and recent CRNT results regarding the steady states of such systems are validated. Additionally, some of these algorithms yield deficiency zero networks - a necessary property for the existence of complex-balanced steady states. Finally, the proposed algorithms are applied to the GMA representation of the carbon cycle models by Anderies et al. and Heck et al., demonstrating the existence of concentration robustness in these models.

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